* = contributed equally; ✉ = corresponding author
Under Review or In Preparaton:
Ahn S✉, Richards V, Thomas E, Jayaweera D, Govind V, Li Z, Cohen R, Cook R. Impact of Contingency Management Intervention Among Heavy Drinkers With and Without HIV on Liver Outcomes up to 90-Days Follow-Up. Submitted to Gut and Liver.
Wijayabahu A*, Ahn S*, Leeman R, Cohen R, Govind V, Devieux J, Baum M, Zhou Z, Li Z, Cook R. Changes in the Mediterranean Dietary Pattern After a 30-Day Drinking Reduction Contingency Management Intervention.
Under Review at Alcohol: Clinical and Experimental Research.
Oh EJ, Ahn S, Tham T, Qian M. Expert-Guided Penalized Cox Regression Methods for Two-Phase Data with Application to Nasopharyngeal Cancer.
Major Revision, Biometrics.
Ahn S, Li Z. Causal Mediation Analysis for Microbiome Data With Survival Outcome.
In preparation.
Ahn S✉, Fu W, Li Z. A Framework for Survival Mediation Analysis of High-Dimensional Proteogenomic Data.
In preparation.
Gebru NM, James TG, Ahn S, Cheong JW, Berry MS, Kahler CW, Cook RL, Leeman RF. Relations between Sexual Delay Discounting and Alcohol Use in the Context of Pre-Exposure Prophylaxis.
In preparation.
Barrow A, Richards V, Ahn S, Leeman R, Barnett N, Porges E, Cook RL, Wang Y. Validating a New-Generation Wrist-Worn Alcohol Biosensor Among Persons With and Without HIV in a Laboratory Setting.
In preparation.
Statistical and Computational Methods:
Ahn S, Datta S. (2024). Differential Network Connectivity Analysis for Microbiome Data Adjusted for Clinical Covariates Using Jackknife Pseudo-Values. BMC Bioinformatics. 25(1):117. PMID: 38500042.
Ahn S✉, Datta S. (2024). SOHPIE: Statistical Approach via Pseudo-Value Information and Estimation for Differential Network Analysis of Microbiome Data. Bioinformatics. 40(1):btad766. PMID: 38134422. [R package]
Ahn S✉, Datta S. (2023). PRANA: an R Package for Differential Co-Expression Network Analysis with the Presence of Additional Covariates. BMC Genomics. 24(1):687. PMID: 37974076. [R package]
Ahn S, Grimes T, Datta S. (2023). A Pseudo-Value Regression Approach for Differential Network Analysis of Co-Expression Data. BMC Bioinformatics. 24(1):8. PMID: 36624383.
Collaborative Research (as a lead author):
Ahn S✉, Oh EJ, Saleem MI, Tham T. (2024). Machine Learning Methods in Classification of Prolonged Radiation Therapy in Oropharyngeal Cancer: National Cancer Database.
Otolaryngology-Head and Neck Surgery. Accepted.
Ahn S, Grimes T, Datta S. (2021). The Analysis of Gene Expression Data Incorporating Tumor Purity Information. Frontiers in Genetics. 12:642759. PMID: 34497631.
Collaborative Research (as a co-author):
Gebru NM, James TG, Ahn S, Cheong J, Berry MS, Cook RL, Leeman RF. (2024). A Behavioral Economic Examination of Sexual Behaviors in the Era of Pre-Exposure Prophylaxis via Explanatory Sequential Mixed Methods. Archives of Sexual Behavior. 53(4):1541-1559. PMID: 38472604.
Zhang X, Ahn S, Qiu P, Datta S. (2023). Identification of Shared Biological Features in Four Different Lung Cells Infected with SARS-CoV-2 Virus Through RNA-Seq Analysis. Frontiers in Genetics. 14:1235927. PMID: 37662846.
Hemli J, Ducca E, Chaplin W, Arader L, Scheinerman J, Lesser M, Ahn S, Mihelis E, Jahn L, Patel N, Brinster D. (2022). Transfusion in Root Replacement for Aortic Dissection: STS Adult Cardiac Surgery Database Analysis. Annals of Thoracic Surgery. 114(6):2149-2156. PMID: 35452664.
Zhu D*, Wong A*, Oh EJ, Ahn S, Wotman M, Sahai T, Bottalico D, Frank D, Tham T. (2022). Impact of Treatment Parameters on Racial Survival Differences in Oropharyngeal Cancer: National Cancer Database Study. Otolaryngology-Head and Neck Surgery. 166(6):1134-1143. PMID: 34399637.
Iyeke L, Moss R, Wang J, Sandhu L, Appold B, Kalontar E, Menoudakos D, Ramnarine M, LaVine SP, Ahn S, Richman M. (2022). Reducing Unnecessary ‘Admission’ Chest X-Rays: An Initiative to Minimize Low-Value Care. Cureus. 14(10):e29817. PMID: 36337809.
Kasat K, Ahn S, Smith S, Zoullas S, Ellington M. (2021). Impact of Early-Onset Sepsis Guidelines on Breastfeeding. Journal of Perinatology. 41(10):2499-2504. PMID: 34362994.
Brewer M, Maffei D, Cerise J, Ahn S, DeVoti J, Codipilly C, Lee A, Weinberger B. (2021). Determinants of the Lung Microbiome in Intubated Premature Infants at Risk for Bronchopulmonary Dysplasia. Journal of Maternal–Fetal and Neonatal Medicine. 34(19):3220-3226. PMID: 31736368.
Appold B, Soniega-Sherwood J, Persaud R, Moss R, Ramnarine M, LaVine SP, Bhansali R, Ahn S, Richman M. (2021). Reining in Unnecessary Admission EKGs: A Successful Interdepartmental High–Value Care Initiative. Cureus. 13(9):e18351. PMID: 34722095.
Moss R, Craige E, Levine B, Mittal M, Ahn S, Appold B, Richman M. (2021). Influence of Framing: Recruitment to a Diabetes Disease Management Program from an Emergency Department Improves Enrollment and Outcomes. Cureus. 13(3):e14116. PMID: 33907649.
Hemli J, Scheinerman J, Lesser M, Ahn S, Mihelis E, Jahn L, Patel N, Brinster D. (2020). Transfusion in Elective Aortic Root Replacement: Analysis of the Society of Thoracic Surgeons Adult Cardiac Surgery Database. Annals of Thoracic Surgery. 110(4):1225-1233. PMID: 32119850.
Tham T, Ahn S, Frank D, Kraus D, Costantino P. (2020). Anatomical Subsite Modifies Survival in Oropharyngeal Squamous Cell Carcinoma: A National Cancer Database Study. Head & Neck. 42(3):434-445. PMID: 31773842.
Codipilly CN, Koppel A, Ranasinghe O, Roffe S, Ahn S, Navarathna M, Abeyweera N, Coors C, Purushotham A, Kamoga R, Schanler RJ. (2020). Effects of Human Milk Fortifier Properties on Intrinsic Probiotic Bacteria. Journal of Perinatal Medicine. 48(2):179-183. PMID: 31874102.
Ponda P, Patel C, Ahn S, Webster T. (2020). Integration of a Clinical Scoring System in the Management of Eosinophilic Esophagitis. Journal of Allergy and Clinical Immunology. 8(2):786-789. PMID: 31421277.
Congiusta S, Ascher EM, Ahn S, Nash I. (2020). The Use of Online Physician Training Can Improve Patient Experience and Physician Burnout. American Journal of Medical Quality. 35(3):258-264. PMID: 31470735.
Zaytseva A, Kurepa D, Ahn S, Weinberger B. (2020). Determination of Optimal Endotracheal Tube Tip Depth from the Gum in Neonates by X-Ray and Ultrasound. Journal of Maternal-Fetal and Neonatal Medicine, 33(12):2075-2080. PMID: 30332898.
Eng S, Lee CS, Ahn S, Sharma A. (2020). A Retrospective Analysis of Tumor Lysis Syndrome Management in a Quarternary Care Hospital. Journal of Oncology Pharmacy Practice. 26(2):338-344. PMID: 31088218.
Tham T, Ahn S, Teckie S, Roche A, Frank F, Kraus D, Costantino P. (2019). Survival Impact of Treatment-Related Time Intervals in Nasopharyngeal Carcinoma in the United States. The Laryngoscope, 129(11):2514-2520. PMID: 30702156.
Tham T, Wotman M, Chung C, Ahn S, Dupuis H, Gliagias V, Movsesova T, Kraus D, Costantino P. (2019). Systemic Immune Response in Squamous Cell Carcinoma of the Head and Neck: A Comparative Concordance-index Analysis. European Archives of Oto-Rhino-Laryngology, 276(10):2913-2922. PMID: 31312922.
Wotman M, Oh EJ, Ahn S, Kraus D, Costantino P, Tham T. (2019). HPV Status in Patients with Nasopharyngeal Carcinoma in the United States: a SEER Database Study. American Journal of Otolaryngology, 40(5):705-710. PMID: 31277887.
Kars SM, Villacres-Mori B, Ahn S, Merwin S, Wendolowski S, Gecelter R, Rothman A, Poon S. (2019). Fentanyl versus Remifentanil-Based TIVA for Pediatric Scoliosis Repair: Does it Matter. Regional Anesthesia and Pain Medicine, 44(6):627-631. PMID: 30923248.
Krauss ES, Cronin M, Dengler N, Lesser M, Ahn S, Segal A, Caprini J. (2019). Implementation and Validation of the 2013 Caprini Score for Risk Stratification of Arthroplasty Patients in the Prevention of Venous Thrombosis. Clinical and Applied Thrombosis/Hemostasis, 25, 1076029619838066. PMID: 30939898.
Kirane H, Drits E, Ahn S, Kapoor S, Morgenstern J, Conigliaro J, Enden J. (2019). Addressing the Opioid Crisis: An Assessment of Clinicians’ Training Experience, Practices and Attitudes within a Large Healthcare Organization. Journal of Opioid Management, 15(3): 193-204. PMID: 31343721.
Dolz-Marco R, Balaratnasingam C, Gattoussi S, Ahn S, Yannuzzi LA, Freund KB. (2018). Long-term choroidal thickness changes in eyes with drusenoid pigment epithelium detachment. American Journal of Ophthalmology, 191:23-33. PMID: 29621509.
Balaratnasingam C, Inoue M, Ahn S, McCann J, Dhrami-Gavazi E, Yannuzzi LA, Freund KB. (2016). Vision acuity is correlated with the area of the foveal avascular zone in diabetic retinopathy and retinal vein occlusion. Ophthalmology, 123(11):2352-2367. PMID: 27523615.